version information
contained in
in taxon
member of
Inverse property of inDataset. It permits to navigate to the clusters included in a particular dataset.
Has cluster
Property that permits to define the membership of a cluster of homologs or a sequence unit to a clusters of homologs
Has homologous
It permits to link a cluster with its data source
Has source
Property that associates a cluster of homologs with the taxonomic range at which it has been calculated
Has taxonomic range
Inverse of has homologous. This property permits to find the cluster in which a cluster or sequence unit is included.
Is homologous member
Property that provides the dataset associated with a gene tree node
In dataset
description
identifier
Property that stores the name of the taxonomic range at which a given cluster of homologs has been calculated
tax range
This property links a cluster of homologs with its taxonomic range.
tax range id
version
Taxon
Species
Tree with a root node, which is the common ancestor to all the nodes in the tree
Evolutionary event
Evolutionary event that consists on the duplication of a gene
Evolutionary event related with the evolution of a gene in different species
Basic unit of graphs and trees
A node of a tree whose leaf nodes are sequence units and whose internal nodes are clusters of homologs
Gene tree node
A tree whose content is the result of the application of hierarchical clustering to a dataset
Hierarchical clustering tree
A tree whose leaf nodes correspond to genes
Hierarchical gene tree
Set of homologous sequences
Cluster of homologs
Set of homologous sequences derived from a speciation event.
Cluster of orthologs
A resource that provides information about orthology
Orthology dataset
Set of homologous sequences derived from a duplication event
Cluster of paralogs
protein or DNA sequence as a unit of comparison
Sequence unit
A region of the sequence of the gene
Subgene
The taxonomic range represents the taxon at which a group of sequences are considered members of the same cluster of orthologs/paralogs
Taxonomic range
Collection of data
Dataset
The source of orthology information (e.g., database)
Resource